| Ep # | Japanese Title | Title in Romaji | Title in English* | Source* | Airdate |
| 501 |
| Aka to Kuro no Kurasshu Kengi | Clash of Red & Black Suspicion Part | M58F8-F9 | 0804.14 |
| 502 |
| Keppaku Part | Innocence Part | M58F9-M58F10 | 0804.28 |
| 503 |
| Kesshi Part | Desperation (or Ready to Die) Part | M58F10-F11 | 0805.12 |
| 504 |
| Jyunshoku Part | Killed in the Line of Duty Part | M58F11-M59F1 | 0805.19 |
| 505 |
| Bengoshi Kisaki Eri no Shougen | Lawyer Kisaki Eri's Testimony | M59F2- | 0806.16 |
| 506 | " " | Part 2 | Part 2 | M59F4 | 0806.23 |
| 507 |
| Karaoke bokkusu no Shikaku | Dark Corner of the Karaoke Box | M59F11- | 0806.30 |
| 508 | " " | Part 2 | Part 2 | M60F2 | 0807.07 |
| 509 |
| Aka Shiro Kiiro to Tanteidan | Red, White, Yellow and the Detective Boys | M60F3-5 | 0807.14 |
| 510 |
| Conan VS W Angou Misuterii | Conan VS Double Coded Mystery | M61F8- | 0807.28 |
| 511 |
| Suiri Taiketsu! Shinichi VS Okiya Subaru | Reasoning Showdown! Shinichi VS Okiya Subaru | M61F10 | 0808.04 |
| 512 |
| Kudaketa Horosukoopu | Broken Horoscope | AO | 0808.11 |
| 513 |
| Satsui ha Koohii no Kaori | Intent to Kill is the Smell of Coffee | M60F9- | 0809.01 |
| 514 | " " | Part 2 | Part 2 | M60F11 | 0809.08 |
| 515 |
| Kaitou Kiddo no Shunkanidou Majyuu | Kaitou Kid's Teleportation Magic (1hr SP) | M61F1-4 | 0810.20 |
| 516 |
| Furinkazan Meikyuu no Yoroi Musha | Furinkazan Armour Clad Warrior of the Maze (1hr SP) | M59F5- | 0811.03 |
| 517 | " " | Part 2 | Part 2 | M59F10 | 0811.10 |
| 518 |
| Meiji Ishin Misuterii Tsuaa Tansaku Hen | Meiji Restoration Mystery Tour Investigation Part | AO | 0812.01 |
| 519 | " " | Kaidoku Hen (Part 2) | Deciphering Part (Part 2) | AO | 0812.08 |
| 520 |
| Wainreddo no Kokuhatsu | Indictment by Wine Red | AO | 0812.15 |
| 521 |
| Satsujinhan, Kudo Shinichi | Murderer, Kudo Shinichi | M62F5 - | 0901.19 |
| 522 |
| Shinichi no Shoutai ni Ran no Namida | Shinichi's True Colours and Ran's Tears | M62F11 | 0901.26 |
| 523 |
| Hontou ni Kikitai Koto | What She Really Wants to Ask | M63F1-2 | 0902.02 |
| 524 |
| Nikushimi no Aoi Hibana | Blue Spark of Hatred (?) | M61F5- | 0902.09 |
| 525 | " " | Part 2 | Part 2 | M61F8 | 0902.16 |
| 526 |
| Shinhannin kara no Todokemono | A Delivery from the Real Culprit | M61F11-M62F1 | 0902.23 |
| 527 |
| Kamengeki ni Himerareta Akui | Evil Intent Hidden in a Mask | AO | 0903.02 |
| 528 |
| Yawayoku Nazo wo Seisu | Mind Over Mystery | M62F2- | 0903.09 |
| 529 | " " | Part 2 | Part 2 | M62F4 | 0903.16 |
| 530 |
| Toshidensetsu : Hanmaa Otoko no Shoutai | Urban Legend: Real Identity of the Hammer Man | M60F6- | 0904.18 |
| 531 | " " | Part 2 | Part 2 | M60F8 | 0904.25 |
| 532 |
| Hatsukoi no Kizuato | Scar of First Love | M64F4- | 0905.02 |
| 533 |
| Kako wo Yobu Kizuato | Scar that Invokes the Past | M64F6 | 0905.09 |
| 534 |
| Aratana Kizuato to Kuchibue no Otoko | New Scar and the Man that Whistles | M64F7- | 0905.16 |
| 535 |
| Furuki Kizuato to Keiji no Tama | Old Scar and the Soul of a Police Detective | M64F10 | 0905.23 |
| 536 |
| Kieta Meiga no Himitsu | Secret of the Vanished Masterpiece | AO | 0905.30 |
| 537 |
| Kaitou Kiddo VS Saikyou Kenko | Kaitou Kid VS The Strongest Safe | M64F11- | 0906.13 |
| 538 | " " | Part 2 | Part 2 | M65F2 | 0906.20 |
| 539 |
| Orokamono he no Isan | Fool's Inheritance | AO | 0907.04 |
| 540 |
| Mouri Kogorou Tantei Haigyou no Hi | Day Detective Mouri Kogorou Ceased Business | AO | 0907.11 |
| 541 | " " | Part 2 | Part 2 | AO | 0907.18 |
| 542 |
| Sakana ga Kieru Ikkaku Iwa | Fish Disappear at the One Horn Rock | M64F1- | 0907.25 |
| 543 | " " | Part 2 | Part 2 | M64F3 | 0908.01 |
| 544 |
| Fukyouwaon wo Kanaderu Te | Hand that Plays Discord | AO | 0908.08 |
| 545 |
| Kiri ni Musebu Majou |
Weeping Witch in the Fog (?) Witch Enshrouded in Fog | M63F9- | 0909.05 |
| 546 | " " | Part 2 | Part 2 | M63F11 | 0909.12 |
| 547 |
| Hannin tono Futsukakan (Ichinichime) | With a Criminal for Two Days (The First Day) | AO | 0909.19 |
| 548 |
| " " (Futsukame) | " " (The Second Day) | AO | 0909.26 |
| 549 |
| Kaitenzushi Misuterii | Kaiten-Zushi Mystery | M63F3- | 0910.03 |
| 550 | " " | Part 2 | Part 2 | M63F5 | 0910.10 |